y PlantCAZyme

CAZyme Information

Basic Information
SpeciesBrachypodium distachyon
Cazyme IDBradi3g01700.1
FamilyGT29
Protein PropertiesLength: 460 Molecular Weight: 50779.4 Isoelectric Point: 7.8507
ChromosomeChromosome/Scaffold: 3 Start: 1042076 End: 1045072
DescriptionGlycosyltransferase family 29 (sialyltransferase) family protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT291643630
  NKCRNRTLCIEKLSLVLPETPPYVPQQFGRCAVVGNSGDLLKTKFGDEIDSYDVVIRENGAPIQNYTEFVGTKSTFRLLNRGSAKALDNVVKLDETRKEA
  LIVKTTIHDIMNQMIRELPITNPVYLMLGTSFGSSAKGTGVKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYQMMECLGLVKIH
Full Sequence
Protein Sequence     Length: 460     Download
MRVLPLALAA AIFSGVAAIL IYLSGLSSYG AGGGLSEADL AALAALQGEF GKCVDWDECR    60
MLLLELVHVY VRKDANGLGL QAVAGEDYCH VVMQYPSDTV SKWEDPKTKE PEGLSFEFNL    120
CEAVASWEQV RNSTTVLTKE YIDALPNGWE EYAWRRINKG VLLNKCRNRT LCIEKLSLVL    180
PETPPYVPQQ FGRCAVVGNS GDLLKTKFGD EIDSYDVVIR ENGAPIQNYT EFVGTKSTFR    240
LLNRGSAKAL DNVVKLDETR KEALIVKTTI HDIMNQMIRE LPITNPVYLM LGTSFGSSAK    300
GTGVKALEFA LSICDSVDMY GFTVDPGYKE WTRYFSESRK GHTPLHGRAY YQMMECLGLV    360
KIHSPMRGDP GRVVKWLPTK DTIEAARVAS DKLLKRPGAG SDEPLSTCTM IKKREKGKAP    420
NRSGLRDAAM DHLRYMKGAT RYPLERNAGG GYLCMINDG*                          480
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00777Glyco_transf_296.0e-50161366255+
Gene Ontology
GO TermDescription
GO:0006486protein glycosylation
GO:0008373sialyltransferase activity
GO:0030173integral to Golgi membrane
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAJ15156.102845828438sialyltransferase-like protein [Triticum aestivum]
GenBankEEC72354.102745827426hypothetical protein OsI_05598 [Oryza sativa Indica Group]
RefSeqNP_001045694.102745827438Os02g0118400 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001105843.107445863447sialyltransferase like protein [Zea mays]
RefSeqXP_002451395.102745835447hypothetical protein SORBIDRAFT_04g001370 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2wnf_A0.0000000000000319333899262V Chain V, Crystallographic Structure Of A Putative Chlorite Dismutase
PDB2wnb_A0.0000000000000319333899262A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp
PDB2wml_A0.0000000000000319333899262A Chain A, Crystal Structure Of A Mammalian Sialyltransferase
Transmembrane Domains
StartEnd
729
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO872329369884560
GO8851623001504490
GO7934322911344240
GO793432274244500.00005
GO79343284494560.00005
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_004_00108.5Aquca_019_00142.1Aquca_004_00108.4Aquca_004_00108.3Aquca_004_00108.2
Aquca_004_00108.1
Arabidopsis lyrata906136470934
Arabidopsis thalianaAT3G48820.2AT3G48820.1AT1G08660.1AT1G08660.2
Brachypodium distachyonBradi3g01700.2Bradi3g01700.3Bradi1g67467.1
Brassica rapaBra019569Bra031637
Carica papayaevm.model.supercontig_4.113evm.model.supercontig_70.73
Capsella rubellaCarubv10017505mCarubv10017208mCarubv10009607mCarubv10009038m
Citrus clementinaCiclev10031577mCiclev10031575mCiclev10031902m
Citrus sinensisorange1.1g013814morange1.1g013792morange1.1g017903morange1.1g017882morange1.1g022244m
orange1.1g019465morange1.1g011883m
Cucumis sativusCucsa.014710.2Cucsa.014710.1Cucsa.156010.2Cucsa.156010.1
Eucalyptus grandisEucgr.F04117.1Eucgr.I01604.1Eucgr.G01933.1
Fragaria vescamrna06450.1-v1.0-hybridmrna01393.1-v1.0-hybrid
Glycine maxGlyma05g34110.1Glyma08g05580.4Glyma08g05580.3Glyma08g05580.1Glyma08g05580.2
Glyma19g27546.1Glyma16g05340.1
Gossypium raimondiiGorai.008G209800.2Gorai.008G209800.1Gorai.005G137400.2Gorai.005G137400.1Gorai.005G137400.3
Linum usitatissimumLus10032547Lus10043193Lus10035162Lus10031992
Malus domesticaMDP0000239581MDP0000149927MDP0000165459MDP0000211019MDP0000304668
MDP0000244138
Manihot esculentacassava4.1_007830mcassava4.1_008832m
Medicago truncatulaMedtr7g084010.1Medtr8g099840.2Medtr8g099840.1
Mimulus guttatusmgv1a023151mmgv1a005647m
Oryza sativaLOC_Os02g02620.1LOC_Os11g36420.1
Panicum virgatumPavirv00016935mPavirv00068699mPavirv00023972mPavirv00062875mPavirv00062874m
Physcomitrella patensPp1s457_24V6.1Pp1s209_60V6.1
Phaseolus vulgarisPhvul.002G327200.1Phvul.001G084900.1
Picea abiesMA_30391g0010MA_932319g0010
Populus trichocarpaPotri.015G104100.1Potri.014G145400.2Potri.014G145400.1
Prunus persicappa005917mppa005273m
Ricinus communis30147.m01442930131.m006986
Setaria italicaSi017190mSi026296m
Selaginella moellendorffii406168831178267676584403717
760757656779823
Sorghum bicolorSb04g001370.1Sb05g022210.1
Thellungiella halophilaThhalv10010382mThhalv10007525m
Vitis viniferaGSVIVT01008625001GSVIVT01032992001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)