y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGlycine max
Cazyme IDGlyma08g14676.1
FamilyGH5
Protein PropertiesLength: 503 Molecular Weight: 56748.8 Isoelectric Point: 5.073
ChromosomeChromosome/Scaffold: 08 Start: 10691565 End: 10694446
Description
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH52204870
  MRDHWNTYITEDDFKFMSENGLNAVRIPVGWWTTLDPTPPKPFVGGSLEVLDNAFTWAEKYGIKVIVDLHAAPGSQNGRPHSASRDGYLEWDDSYISDTV
  AAIDFLAERYANSSGLVAIELMNEPQGVNLESLKSYYQAGYDAVRKHTSSAYVIMSNPLDRDSKVLLSFAGAFSGVVIDVHYYNLFSDRFSNMNVQQNID
  FIKKQRVSDLSSLTTSNGPLIFVGEWSSDWKVQSASKIDQQKFTQVQVDVYSRAKFGWAYWAYKCDSN
Full Sequence
Protein Sequence     Length: 503     Download
MSNQLFYANL VLAFYLSCHY ALAQTENFPL PLKAVNLGNW FVIEGWMKPS LFDGITNKDL    60
LDGTQVQFMS TKLQKYLCAE HGGGSVVVAN RTKALGWETF RLWRVNESTF NFRVSSKQFI    120
RLTNQNGGSN LVADSDSPSD METFEILRSD DDPNMVRIRA PNGQFLQAIS ENVVLANYEG    180
SSWDDSDPSV FKMNVLSGSI IRGEYQITNG YGPDKASKIM RDHWNTYITE DDFKFMSENG    240
LNAVRIPVGW WTTLDPTPPK PFVGGSLEVL DNAFTWAEKY GIKVIVDLHA APGSQNGRPH    300
SASRDGYLEW DDSYISDTVA AIDFLAERYA NSSGLVAIEL MNEPQGVNLE SLKSYYQAGY    360
DAVRKHTSSA YVIMSNPLDR DSKVLLSFAG AFSGVVIDVH YYNLFSDRFS NMNVQQNIDF    420
IKKQRVSDLS SLTTSNGPLI FVGEWSSDWK VQSASKIDQQ KFTQVQVDVY SRAKFGWAYW    480
AYKCDSNFWS IKWMIENNYI KL*                                            540
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam02449Glyco_hydro_420.0001222351147+
cd00257Fascin0.000174177104+
pfam00150Cellulase2.0e-22223482276+
COG2730BglC6.0e-33157498382+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankADD09589.1015021504unknown [Trifolium repens]
EMBLCBI18831.1075026505unnamed protein product [Vitis vinifera]
EMBLCBI33033.1055024505unnamed protein product [Vitis vinifera]
EMBLCBI33035.1074836486unnamed protein product [Vitis vinifera]
RefSeqXP_002306319.10335001481predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1eqp_A3e-3520448645363A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
PDB1eqc_A2e-3420448645363A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
PDB1cz1_A2e-3420448645363A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution
Transmembrane Domains
StartEnd
523
Signal Peptide
Cleavage Site
23
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DC8989053781285020
DC8992993191875020
CX664525329453710
GO0145182521964470
AW099843211422520
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_010_00111.1Aquca_010_00110.1
Brachypodium distachyonBradi2g31690.1Bradi3g38500.1
Carica papayaevm.model.supercontig_55.63evm.model.supercontig_66.87evm.model.supercontig_20.222
Citrus clementinaCiclev10025463mCiclev10026955mCiclev10025415mCiclev10000913m
Citrus sinensisorange1.1g009560morange1.1g046395morange1.1g019395morange1.1g013777morange1.1g010600m
orange1.1g009475m
Cucumis sativusCucsa.104180.2Cucsa.104180.1
Eucalyptus grandisEucgr.I00417.1Eucgr.L01170.1Eucgr.L02139.1Eucgr.I00543.1Eucgr.I00415.1
Eucgr.F00486.1Eucgr.F00489.1Eucgr.F00489.3Eucgr.F00489.2Eucgr.F00487.1
Eucgr.L01169.1Eucgr.F00488.1Eucgr.I00415.2
Fragaria vescamrna16220.1-v1.0-hybridmrna16368.1-v1.0-hybridmrna22085.1-v1.0-hybridmrna16374.1-v1.0-hybrid
Glycine maxGlyma11g37881.1Glyma18g01781.2Glyma18g01781.3Glyma18g01781.1Glyma06g47761.6
Glyma06g47761.1Glyma06g47761.5Glyma06g47761.2Glyma06g47761.8Glyma06g47761.4
Glyma06g47761.7Glyma06g47761.3Glyma13g02030.2Glyma06g47750.1Glyma13g02000.1
Glyma05g31460.1Glyma14g34450.1
Gossypium raimondiiGorai.009G239600.6Gorai.009G239600.5Gorai.009G239600.4Gorai.009G239600.1Gorai.009G239600.3
Gorai.009G239600.2Gorai.009G239600.7Gorai.011G110800.2Gorai.011G110800.1Gorai.003G041900.1
Gorai.003G044300.1Gorai.003G044000.4Gorai.003G044000.5Gorai.003G044200.1Gorai.003G044000.3
Gorai.003G044000.2Gorai.003G044000.1
Linum usitatissimumLus10041110Lus10036436
Malus domesticaMDP0000319015MDP0000123200MDP0000133367
Manihot esculentacassava4.1_007845mcassava4.1_026104mcassava4.1_006238m
Medicago truncatulaMedtr3g009020.1Medtr3g086750.1Medtr3g009030.1Medtr5g062290.1Medtr3g008960.1
Medtr5g062190.1Medtr3g009010.1Medtr8g091310.1
Mimulus guttatusmgv1a004896mmgv1a019918m
Oryza sativaLOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22520.1LOC_Os10g22570.1.671.954
LOC_Os10g22570.1.671.954LOC_Os10g22570.1.671.954LOC_Os05g15510.2LOC_Os05g15510.1LOC_Os08g37750.1
Panicum virgatumPavirv00046245mPavirv00011301mPavirv00018291mPavirv00046244mPavirv00011300m
Pavirv00028658mPavirv00000970mPavirv00042459mPavirv00046564m
Physcomitrella patensPp1s304_43V6.1
Phaseolus vulgarisPhvul.001G254400.1Phvul.008G171300.1Phvul.002G261800.1Phvul.008G171400.1
Picea abiesMA_10427061g0010MA_479818g0010MA_4911g0010MA_14445g0010MA_23595g0010
Populus trichocarpaPotri.007G010000.1Potri.005G167800.1Potri.007G089400.1Potri.007G089400.2Potri.005G078500.1
Potri.002G093000.1
Prunus persicappa023601mppa005425mppa019648m
Ricinus communis29810.m00014529908.m00599427889.m00017327905.m00007336339.m000016
Setaria italicaSi035257mSi006205mSi021695mSi021671mSi039329m
Si013558mSi035337m
Selaginella moellendorffii12682742658240418324801
Sorghum bicolorSb10g007500.1Sb09g008170.1Sb01g024390.1Sb10g008480.1
Vitis viniferaGSVIVT01003438001GSVIVT01006372001GSVIVT01006369001GSVIVT01002801001GSVIVT01008995001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)