y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.001G127700.1
FamilyGH3
Protein PropertiesLength: 218 Molecular Weight: 23751.1 Isoelectric Point: 9.5879
ChromosomeChromosome/Scaffold: 01 Start: 16168663 End: 16170682
DescriptionGlycosyl hydrolase family protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH31021997.8e-36
  STRLQIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPQLIKKIGDATALKVRATGIFYVFAPCIAVCRDPRWGRCYESYSEDHKIVQLMTEIIPGL
Full Sequence
Protein Sequence     Length: 218     Download
MGRFSIPKLG ILLLCCLAAV SEATYAKYKD PKQPVAVRIE DLMSRMTLAE KIGQMTQIER    60
SVATPDVMKK ECLSGRGSVP AIKATPETCI KMVNTIQKGS LSTRLQIPMI YGIDAVHGHN    120
NVYKATIFPH NVGLGVTRDP QLIKKIGDAT ALKVRATGIF YVFAPCIAVC RDPRWGRCYE    180
SYSEDHKIVQ LMTEIIPGLL GDIPGNSKKG VPFVCGK*                            240
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PLN03080PLN030802.0e-611189214+
PRK15098PRK150985.0e-2414206201+
COG1472BglX7.0e-2746202162+
pfam00933Glyco_hydro_37.0e-3747199156+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAQ17461.1012171221beta-D-glucosidase [Gossypium hirsutum]
EMBLCAA07070.1012171222beta-D-glucosidase [Tropaeolum majus]
EMBLCBI24412.1012171224unnamed protein product [Vitis vinifera]
RefSeqXP_002278363.1012171221PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
RefSeqXP_002278377.1012171221PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1x39_A0252172198A Chain A, Crystal Structure Of Streptomyces Caespitosus Sermetstatin In Complex With S. Caespitosus Snapalysin
PDB1x38_A0252172198A Chain A, Crystal Structure Of Streptomyces Caespitosus Sermetstatin In Complex With S. Caespitosus Snapalysin
PDB1lq2_A0252172198A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole
PDB1j8v_A0252172198A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole
PDB1iex_A0252172198A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole
Signal Peptide
Cleavage Site
23
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FC88274722112170
CU53544221512110
DY29273622112170
FC88451421912150
DY29029722112170
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_009_00600.1Aquca_009_00598.3Aquca_009_00598.2Aquca_009_00598.1Aquca_009_00603.1
Aquca_009_00596.1Aquca_009_00601.1Aquca_009_00602.1Aquca_009_00735.2Aquca_009_00735.1
Aquca_009_00596.4Aquca_009_00596.3Aquca_009_00596.2Aquca_009_00596.5Aquca_009_00735.3
Aquca_009_00601.2
Arabidopsis lyrata485082489005487274489003485079
323329486769485080
Arabidopsis thalianaAT5G20950.2AT5G20950.1AT5G04885.1AT5G20940.1AT3G47000.1
AT3G47010.2AT3G47010.1AT3G47050.2AT3G47050.1AT3G62710.1
AT3G47040.1AT3G47040.2
Brachypodium distachyonBradi1g08550.2Bradi1g08570.2Bradi1g08570.1Bradi2g51280.1Bradi1g08560.1
Bradi1g08580.1Bradi2g23720.1
Brassica rapaBra005825Bra020139Bra009417Bra003508Bra018177
Bra014397Bra002346Bra018172Bra006587Bra018171
Bra033795
Carica papayaevm.model.supercontig_103.89evm.model.supercontig_51.147evm.model.supercontig_103.88evm.model.supercontig_51.146evm.model.supercontig_103.83
evm.model.supercontig_112.57evm.model.supercontig_103.85
Capsella rubellaCarubv10016857mCarubv10000466mCarubv10000396mCarubv10002603mCarubv10016864m
Carubv10019506mCarubv10016871mCarubv10018993m
Citrus clementinaCiclev10019305mCiclev10030270mCiclev10018271mCiclev10017853mCiclev10015118m
Ciclev10014767mCiclev10014537mCiclev10028019mCiclev10028018mCiclev10028048m
Citrus sinensisorange1.1g038523morange1.1g036635morange1.1g006872morange1.1g013915morange1.1g013894m
orange1.1g013886morange1.1g040637m
Cucumis sativusCucsa.340290.1Cucsa.282900.1Cucsa.111760.1Cucsa.340300.1Cucsa.356980.1
Cucsa.146890.1Cucsa.146880.2Cucsa.146880.1Cucsa.146890.3Cucsa.146890.2
Cucsa.340290.2Cucsa.109190.1
Eucalyptus grandisEucgr.J00606.1Eucgr.J00608.1Eucgr.A02118.1Eucgr.J00609.1Eucgr.G02657.1
Eucgr.J00604.1Eucgr.J00603.1Eucgr.J00605.1Eucgr.B02287.1Eucgr.B02276.1
Eucgr.A02116.1Eucgr.J00607.1
Fragaria vescamrna03614.1-v1.0-hybridmrna07689.1-v1.0-hybridmrna07690.1-v1.0-hybridmrna07985.1-v1.0-hybridmrna22463.1-v1.0-hybrid
mrna00353.1-v1.0-hybridmrna22192.1-v1.0-hybrid
Glycine maxGlyma19g29050.1Glyma10g15980.1Glyma17g24410.1Glyma15g13620.1Glyma09g02731.2
Glyma09g02731.1Glyma02g43990.2Glyma02g43990.1Glyma14g04940.2Glyma14g04940.1
Glyma02g33550.1Glyma16g04330.1Glyma19g29060.1Glyma16g04340.1Glyma02g39010.1
Glyma11g22940.2Glyma11g22940.1Glyma02g43990.3Glyma14g37070.1Glyma18g07260.2
Gossypium raimondiiGorai.009G081100.1Gorai.006G118100.3Gorai.006G118100.2Gorai.006G118100.1Gorai.009G301800.2
Gorai.009G301800.1Gorai.013G114800.5Gorai.013G114800.4Gorai.013G114800.3Gorai.013G114800.2
Gorai.013G114800.11Gorai.013G114800.10Gorai.013G114800.1Gorai.007G260100.2Gorai.007G260100.1
Gorai.007G260000.1Gorai.013G260700.3Gorai.013G260700.2Gorai.013G260700.1Gorai.002G219500.1
Gorai.009G093600.1Gorai.013G114800.6Gorai.013G114800.8Gorai.013G114800.7Gorai.013G260700.4
Gorai.013G114800.9Gorai.013G114800.12Gorai.001G127600.1
Linum usitatissimumLus10001151Lus10013646Lus10010656Lus10033393Lus10005706
Lus10010657Lus10005871Lus10001200.86.321Lus10013390Lus10022413
Lus10018102Lus10008432Lus10023604Lus10013388Lus10008434
Lus10043457Lus10034848Lus10013647
Malus domesticaMDP0000765919MDP0000196385MDP0000062066MDP0000272685MDP0000194876
MDP0000119414MDP0000140449MDP0000218589MDP0000191983MDP0000171861
MDP0000153761MDP0000121876MDP0000154790MDP0000190086MDP0000243329
MDP0000552093MDP0000163344MDP0000119413MDP0000235035MDP0000302379
Manihot esculentacassava4.1_033854mcassava4.1_024895mcassava4.1_030227mcassava4.1_003201mcassava4.1_003199m
cassava4.1_003582mcassava4.1_024363m
Medicago truncatulaMedtr3g079750.1Medtr2g030000.1Medtr7g086030.1Medtr5g069800.1Medtr7g086010.1
Medtr5g069740.1AC235673_11.1
Mimulus guttatusmgv1a002814mmgv1a003439mmgv1a002476mmgv1a002879mmgv1a002782m
mgv1a002845mmgv1a019891mmgv1a020896mmgv1a003116mmgv1a003210m
Oryza sativaLOC_Os03g53800.5LOC_Os03g53800.4LOC_Os03g53800.3LOC_Os03g53800.2LOC_Os03g53800.1
LOC_Os03g53860.5LOC_Os03g53860.4LOC_Os03g53860.3LOC_Os03g53860.2LOC_Os03g53860.1
LOC_Os02g03870.1LOC_Os01g56510.5LOC_Os01g56510.4LOC_Os01g56510.3LOC_Os01g56510.2
LOC_Os01g56510.1LOC_Os03g53790.1LOC_Os05g37700.1LOC_Os05g37700.2
Panicum virgatumPavirv00044084mPavirv00044083mPavirv00044082mPavirv00057654mPavirv00000883m
Pavirv00015776mPavirv00021236mPavirv00021235mPavirv00001262mPavirv00040732m
Pavirv00029174mPavirv00022627mPavirv00015364mPavirv00023155mPavirv00060136m
Pavirv00060135mPavirv00023191mPavirv00015460mPavirv00012515mPavirv00047960m
Pavirv00013835m
Physcomitrella patensPp1s1821_1V6.1Pp1s217_8V6.1Pp1s309_65V6.2Pp1s309_65V6.1Pp1s49_195V6.1
Phaseolus vulgarisPhvul.007G250300.1Phvul.004G050500.1Phvul.006G128800.1Phvul.008G210100.1Phvul.001G112700.1
Phvul.006G065600.1Phvul.001G112600.2Phvul.001G112600.1
Picea abiesMA_10437038g0010MA_56211g0010MA_41345g0010MA_10429527g0010MA_10435456g0010
MA_10247978g0010MA_10435456g0020MA_8496645g0010MA_10435456g0030
Populus trichocarpaPotri.019G037400.1Potri.013G055600.2Potri.013G055600.1Potri.008G013500.1Potri.019G037400.2
Potri.008G013700.1Potri.009G153900.3Potri.009G153900.1Potri.009G153900.2Potri.009G042800.2
Potri.009G042800.1Potri.009G154000.1Potri.009G154800.1Potri.009G153900.4Potri.005G059200.1
Prunus persicappa014605mppa020836mppa014607mppa002559mppa015239m
ppa002894mppa003012mppa025914mppa014895mppa026252m
ppa006354mppa018735mppa022452mppa021476m
Ricinus communis43378.m00001329976.m00048930072.m00098129852.m00202029976.m000487
29681.m00129734040.m000025
Setaria italicaSi034693mSi034691mSi034690mSi034605mSi034551m
Si034710mSi034709mSi034708mSi034705mSi034703m
Si020199mSi000575mSi020102mSi019228mSi019105m
Si004089mSi040033mSi024819mSi021490mSi035613m
Selaginella moellendorffii15726074114
Sorghum bicolorSb01g008040.3Sb01g008040.2Sb01g008040.1Sb01g008030.5Sb01g008030.4
Sb01g008030.3Sb01g008030.2Sb01g008030.1Sb03g035970.1Sb04g002570.1
Sb04g002560.1Sb04g002580.1Sb01g008050.1Sb09g022050.2Sb09g022050.1
Thellungiella halophilaThhalv10012965mThhalv10012964mThhalv10012963mThhalv10012900mThhalv10015493m
Thhalv10010277mThhalv10010212mThhalv10005832mThhalv10010213mThhalv10010219m
Vitis viniferaGSVIVT01012185001GSVIVT01037543001GSVIVT01023452001GSVIVT01023455001GSVIVT01022483001
GSVIVT01034613001GSVIVT01037542001GSVIVT01024793001GSVIVT01037547001GSVIVT01037546001
Zea maysAC197578.4_FGT001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)