y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.001G151600.1
FamilyCE11
Protein PropertiesLength: 195 Molecular Weight: 21393.5 Isoelectric Point: 8.1217
ChromosomeChromosome/Scaffold: 01 Start: 21064150 End: 21068546
DescriptionUDP-3-O-acyl N-acetylglycosamine deacetylase family protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CE11251920
  QQTLAGCIKLSGKTLQSGKVSKVKIWPGFTGQGRYFEFHSNLIPASIDFVRESLLCTSLCKDGYKIRTVEHLLSALEAKGIDNCRVQIQSLDSEDTEVEV
  PIFDGSANAWVEAIEQVGRKEALDRCGNNVEKLAPYLSEPFYVSRNDSFMVAFPASKVHISCGIDFPK
Full Sequence
Protein Sequence     Length: 195     Download
MHLSAAINSF KSSNLISWKT TGKLQQTLAG CIKLSGKTLQ SGKVSKVKIW PGFTGQGRYF    60
EFHSNLIPAS IDFVRESLLC TSLCKDGYKI RTVEHLLSAL EAKGIDNCRV QIQSLDSEDT    120
EVEVPIFDGS ANAWVEAIEQ VGRKEALDRC GNNVEKLAPY LSEPFYVSRN DSFMVAFPAS    180
KVHISCGIDF PKGK*                                                     240
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PRK13188PRK131882.0e-2425191175+
TIGR00325lpxC5.0e-2925191172+
COG0774LpxC8.0e-3524191174+
pfam03331LpxC5.0e-3725191172+
PRK13186lpxC6.0e-4525191171+
Gene Ontology
GO TermDescription
GO:0008759UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
GO:0009245lipid A biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI26831.1011921192unnamed protein product [Vitis vinifera]
RefSeqNP_001117351.10819222206UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana]
RefSeqNP_173874.20819222206UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana]
RefSeqNP_173884.50819265249UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana]
RefSeqXP_002281269.1011921192PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4fw7_D0.0000000000001251907163A Chain A, Crystal Structure Of Campylobacter Jejuni Chuz
PDB4fw7_C0.0000000000001251907163A Chain A, Crystal Structure Of Campylobacter Jejuni Chuz
PDB4fw7_B0.0000000000001251907163A Chain A, Crystal Structure Of Campylobacter Jejuni Chuz
PDB4fw7_A0.0000000000001251907163A Chain A, Crystal Structure Of Campylobacter Jejuni Chuz
PDB4fw6_D0.0000000000001251907163A Chain A, Crystal Structure Of Campylobacter Jejuni Chuz
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
BE05397119211920
BQ40553118671920
CU58589419031920
FY92407019111910
FS95316518291900
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_091_00088.3Aquca_091_00088.2Aquca_091_00088.1
Arabidopsis lyrata472870
Arabidopsis thalianaAT1G25054.1AT1G24793.2AT1G25210.2AT1G24793.1AT1G24880.1
AT1G25054.2AT1G25145.1AT1G25210.1
Brachypodium distachyonBradi1g69490.1
Brassica rapaBra010979
Carica papayaevm.model.supercontig_2.193
Capsella rubellaCarubv10009664m
Chlamydomonas reinhardtiiCre16.g653350.t1.2
Citrus clementinaCiclev10015996mCiclev10015964m
Citrus sinensisorange1.1g042138m
Cucumis sativusCucsa.188640.1Cucsa.188650.1
Eucalyptus grandisEucgr.B02675.2Eucgr.B02675.1
Glycine maxGlyma02g09350.1
Gossypium raimondiiGorai.002G172000.4Gorai.002G172000.5Gorai.002G172000.3Gorai.002G172000.1Gorai.002G172000.2
Gorai.002G172000.6Gorai.010G050600.1Gorai.005G149500.1Gorai.005G145500.1Gorai.009G391300.3
Gorai.009G391300.2Gorai.009G391300.1Gorai.007G245600.1
Linum usitatissimumLus10003708Lus10001592
Malus domesticaMDP0000319902MDP0000264715MDP0000150490
Manihot esculentacassava4.1_012733m
Mimulus guttatusmgv1a025203m
Oryza sativaLOC_Os03g12320.3LOC_Os03g12320.2LOC_Os03g12320.1
Panicum virgatumPavirv00014435mPavirv00025226m
Physcomitrella patensPp1s1_376V6.1
Phaseolus vulgarisPhvul.003G019200.2Phvul.003G019200.1
Picea abiesMA_159099g0220MA_10433938g0010
Populus trichocarpaPotri.010G106400.1Potri.010G106400.2Potri.T177300.1Potri.010G106400.3
Prunus persicappa009014m
Ricinus communis29673.m000948
Setaria italicaSi036592mSi010565mSi036620m
Selaginella moellendorffii117127
Sorghum bicolorSb01g042410.1
Thellungiella halophilaThhalv10007963m
Vitis viniferaGSVIVT01011660001
Volvox carteriVocar20012425m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny