y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.001G218100.1
FamilyGT19
Protein PropertiesLength: 467 Molecular Weight: 52174.1 Isoelectric Point: 9.9937
ChromosomeChromosome/Scaffold: 01 Start: 43954685 End: 43958979
Descriptiontransferases, transferring glycosyl groups
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT19454260
  VFIVAGEVSGDSIASRLMASLNKISPLPIRFSGVGGSRMSNQGLKSLFPMENIAVMGIWELLPHFYNFRVKLKETVEAALQFQPHVVVTVDSKGFSFRLL
  KQLRARYNQQRSDRPVLFHYVAPSFWAWKGGEARLKGLSKFVDYVFCILPNEEAGCKLNGLNATFVGHPILEDVLELNMGKETALHEWKITGNGEDFRKK
  YAIASGATVITLLPGSRLQEVTRMLPIFSNTMKLLKDSFPELVTVIHVAPNQLVDNYIAKAVHKWPVPAILIPGGTPQLKYDAFNASLVALCTSGTVAME
  LQLARLPCLVTYRAHFLTEWFVRHKAKIPYISLPNILLDSPVIPEALFQACTPAKVAFLLKELMNNTVLQQQQIAAAEKVME
Full Sequence
Protein Sequence     Length: 467     Download
MWLAAIRFVN IFKNSICWKT PLRRYLWVSS KSLIDRAASE GELRVFIVAG EVSGDSIASR    60
LMASLNKISP LPIRFSGVGG SRMSNQGLKS LFPMENIAVM GIWELLPHFY NFRVKLKETV    120
EAALQFQPHV VVTVDSKGFS FRLLKQLRAR YNQQRSDRPV LFHYVAPSFW AWKGGEARLK    180
GLSKFVDYVF CILPNEEAGC KLNGLNATFV GHPILEDVLE LNMGKETALH EWKITGNGED    240
FRKKYAIASG ATVITLLPGS RLQEVTRMLP IFSNTMKLLK DSFPELVTVI HVAPNQLVDN    300
YIAKAVHKWP VPAILIPGGT PQLKYDAFNA SLVALCTSGT VAMELQLARL PCLVTYRAHF    360
LTEWFVRHKA KIPYISLPNI LLDSPVIPEA LFQACTPAKV AFLLKELMNN TVLQQQQIAA    420
AEKVMELLCP PNRTLNNTEQ QGMKPSPPSY SPSMIAASTI LSYKQR*                  480
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PRK01021lpxB2.0e-3546428396+
TIGR00215lpxB8.0e-4845410368+
pfam02684LpxB2.0e-6445428386+
COG0763LpxB2.0e-9343419379+
PRK00025lpxB1.0e-10043428403+
Gene Ontology
GO TermDescription
GO:0008915lipid-A-disaccharide synthase activity
GO:0009245lipid A biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI28885.10374652430unnamed protein product [Vitis vinifera]
GenBankEEC71491.102946130463hypothetical protein OsI_03760 [Oryza sativa Indica Group]
RefSeqNP_178535.202346619455transferase, transferring glycosyl groups [Arabidopsis thaliana]
RefSeqXP_002458499.10284664443hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor]
RefSeqXP_002528957.1054635466Lipid-A-disaccharide synthase, putative [Ricinus communis]
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EY717263275813550
EE622357258923490
FY42947427622730
DC6015432051733770
EY717263443403830.000003
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_006_00075.3Aquca_006_00075.2Aquca_006_00075.1
Arabidopsis lyrata480096
Arabidopsis thalianaAT2G04560.1
Brachypodium distachyonBradi2g50040.1
Brassica rapaBra015155.41.173Bra015155.41.173Bra015155.191.448Bra015155.191.448
Carica papayaevm.model.supercontig_132.41
Capsella rubellaCarubv10016120m
Citrus clementinaCiclev10018214m
Citrus sinensisorange1.1g024872morange1.1g016179m
Cucumis sativusCucsa.139770.1
Eucalyptus grandisEucgr.K00731.1
Fragaria vescamrna01138.1-v1.0-hybrid
Glycine maxGlyma02g11180.1
Gossypium raimondiiGorai.001G218100.5Gorai.001G218100.6Gorai.001G218100.4Gorai.001G218100.3Gorai.001G218100.2
Linum usitatissimumLus10035357Lus10029959
Malus domesticaMDP0000254582MDP0000227552
Manihot esculentacassava4.1_026066m
Mimulus guttatusmgv1a006184m
Oryza sativaLOC_Os01g54900.1
Panicum virgatumPavirv00020712mPavirv00034263mPavirv00034264mPavirv00034262m
Physcomitrella patensPp1s51_278V6.2Pp1s51_278V6.1Pp1s51_297V6.1Pp1s98_156V6.1
Phaseolus vulgarisPhvul.003G026900.1
Picea abiesMA_10428134g0010MA_159001g0240MA_10297492g0010
Populus trichocarpaPotri.014G160300.1
Prunus persicappa026476m
Ricinus communis56517.m00002234198.m00002229620.m000548
Selaginella moellendorffii405438
Sorghum bicolorSb03g034785.1
Thellungiella halophilaThhalv10002525m
Vitis viniferaGSVIVT01030530001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny