y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.002G172000.2
FamilyCE11
Protein PropertiesLength: 317 Molecular Weight: 34813.9 Isoelectric Point: 6.9587
ChromosomeChromosome/Scaffold: 02 Start: 43608941 End: 43614585
DescriptionUDP-3-O-acyl N-acetylglycosamine deacetylase family protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CE11253080
  QQTLAGCIELSGKTLHSGKVSKVKIWPVFAGEGRYFEFHSNLIPASIDFVRESLLCTTLCKDGYKIRTVEHLLSALEAKGIDNCRIQIQSLDSEDTEVEV
  PIFDGSANAWVEAIEQVGRKEALDRCGNNVEKLAPHLSEPFYVSRNDSFMVAFPASKVHISCGIDFPKVPAIGCQWFSSAALDDSYEKHIACSRTFCIYE
  EVEHMCSMGLIKGGSLDNAIVCSATKGWLNPPLRFPDEPCRHKVLDLIGDLSLFARSGSQGFPMARVISFKGGHSLNADFVRRL
Full Sequence
Protein Sequence     Length: 317     Download
MRLSAAINSF KSSNLISWKT TGKLQQTLAG CIELSGKTLH SGKVSKVKIW PVFAGEGRYF    60
EFHSNLIPAS IDFVRESLLC TTLCKDGYKI RTVEHLLSAL EAKGIDNCRI QIQSLDSEDT    120
EVEVPIFDGS ANAWVEAIEQ VGRKEALDRC GNNVEKLAPH LSEPFYVSRN DSFMVAFPAS    180
KVHISCGIDF PKVPAIGCQW FSSAALDDSY EKHIACSRTF CIYEEVEHMC SMGLIKGGSL    240
DNAIVCSATK GWLNPPLRFP DEPCRHKVLD LIGDLSLFAR SGSQGFPMAR VISFKGGHSL    300
NADFVRRLSG ITVQET*                                                   360
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PRK13188PRK131882.0e-6425309318+
TIGR00325lpxC1.0e-7025308290+
COG0774LpxC5.0e-8524308294+
pfam03331LpxC2.0e-8825308290+
PRK13186lpxC9.0e-10125308292+
Gene Ontology
GO TermDescription
GO:0008759UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
GO:0009245lipid A biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN61403.1013121367hypothetical protein [Vitis vinifera]
EMBLCBI26831.1013121313unnamed protein product [Vitis vinifera]
RefSeqNP_173874.2013091324UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana]
RefSeqNP_173884.50130944367UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana]
RefSeqXP_002281269.1012951296PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1xxe_A2e-37243093264A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex
PDB2go4_B1e-36243093264A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex
PDB2go4_A1e-36243093264A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex
PDB2go3_B1e-36243093264A Chain A, Crystal Structure Of Aquifex Aeolicus Lpxc Complexed With Imidazole.
PDB2go3_A1e-36243093264A Chain A, Crystal Structure Of Aquifex Aeolicus Lpxc Complexed With Imidazole.
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
BQ40553121472200
BE05397120112010
CU58589422832300
CK277774275112840
CK277774372773120.003
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_091_00088.3Aquca_091_00088.2Aquca_091_00088.1
Arabidopsis lyrata472870
Arabidopsis thalianaAT1G25054.1AT1G24793.2AT1G25210.2AT1G24793.1AT1G24880.1
AT1G25054.2AT1G25145.1AT1G25210.1
Brachypodium distachyonBradi1g69490.1
Brassica rapaBra010979
Carica papayaevm.model.supercontig_2.193
Capsella rubellaCarubv10009664m
Chlamydomonas reinhardtiiCre16.g653350.t1.2
Citrus clementinaCiclev10015996mCiclev10015964m
Citrus sinensisorange1.1g042138m
Cucumis sativusCucsa.188640.1Cucsa.188650.1
Eucalyptus grandisEucgr.B02675.2Eucgr.B02675.1
Glycine maxGlyma02g09350.1
Gossypium raimondiiGorai.002G172000.4Gorai.002G172000.5Gorai.002G172000.3Gorai.002G172000.1Gorai.002G172000.6
Gorai.001G151600.1Gorai.010G050600.1Gorai.005G149500.1Gorai.005G145500.1Gorai.009G391300.3
Gorai.009G391300.2Gorai.009G391300.1Gorai.007G245600.1
Linum usitatissimumLus10003708Lus10001592
Malus domesticaMDP0000319902MDP0000264715MDP0000150490
Manihot esculentacassava4.1_012733m
Mimulus guttatusmgv1a025203m
Oryza sativaLOC_Os03g12320.3LOC_Os03g12320.2LOC_Os03g12320.1
Panicum virgatumPavirv00014435mPavirv00025226m
Physcomitrella patensPp1s1_376V6.1
Phaseolus vulgarisPhvul.003G019200.2Phvul.003G019200.1
Picea abiesMA_159099g0220MA_10433938g0010
Populus trichocarpaPotri.010G106400.1Potri.010G106400.2Potri.T177300.1Potri.010G106400.3
Prunus persicappa009014m
Ricinus communis29673.m000948
Setaria italicaSi036592mSi010565mSi036620m
Selaginella moellendorffii117127
Sorghum bicolorSb01g042410.1
Thellungiella halophilaThhalv10007963m
Vitis viniferaGSVIVT01011660001
Volvox carteriVocar20012425m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny