y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.002G172000.5
FamilyCE11
Protein PropertiesLength: 241 Molecular Weight: 26667.6 Isoelectric Point: 5.9507
ChromosomeChromosome/Scaffold: 02 Start: 43609000 End: 43611409
DescriptionUDP-3-O-acyl N-acetylglycosamine deacetylase family protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CE11252270
  QQTLAGCIELSGKTLHSGKVSKVKIWPVFAGEGRYFEFHSNLIPASIDFVRESLLCTTLCKDGYKIRTVEHLLSALEAKGIDNCRIQIQSLDSEDTEVEV
  PIFDGSANAWVEAIEQVGRKEALDRCGNNVEKLAPHLSEPFYVSRNDSFMVAFPASKVHISCGIDFPKVPAIGCQWFSSAALDDSYEKHIACSRTFCIYE
  EVQ
Full Sequence
Protein Sequence     Length: 241     Download
MRLSAAINSF KSSNLISWKT TGKLQQTLAG CIELSGKTLH SGKVSKVKIW PVFAGEGRYF    60
EFHSNLIPAS IDFVRESLLC TTLCKDGYKI RTVEHLLSAL EAKGIDNCRI QIQSLDSEDT    120
EVEVPIFDGS ANAWVEAIEQ VGRKEALDRC GNNVEKLAPH LSEPFYVSRN DSFMVAFPAS    180
KVHISCGIDF PKVPAIGCQW FSSAALDDSY EKHIACSRTF CIYEEVQCEL ISSFLVIVLF    240
*                                                                    300
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PRK13188PRK131884.0e-3725227211+
TIGR00325lpxC5.0e-3825227208+
COG0774LpxC1.0e-4524227212+
pfam03331LpxC1.0e-5025232213+
PRK13186lpxC1.0e-5625227210+
Gene Ontology
GO TermDescription
GO:0008759UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
GO:0009245lipid A biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN61403.1012261249hypothetical protein [Vitis vinifera]
EMBLCBI26831.1012271228unnamed protein product [Vitis vinifera]
RefSeqNP_001117351.1012271242UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana]
RefSeqNP_173874.2012271242UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana]
RefSeqXP_002281269.1012271228PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4fw7_D8e-16252277201A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp
PDB4fw7_C8e-16252277201A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp
PDB4fw7_B8e-16252277201A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp
PDB4fw7_A8e-16252277201A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp
PDB4fw6_D8e-16252277201A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
BQ40553121472200
BE05397120112010
CU58589422532270
FY92407022112200
FS95316522512240
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_091_00088.3Aquca_091_00088.2Aquca_091_00088.1
Arabidopsis lyrata472870
Arabidopsis thalianaAT1G25054.1AT1G24793.2AT1G25210.2AT1G24793.1AT1G24880.1
AT1G25054.2AT1G25145.1AT1G25210.1
Brachypodium distachyonBradi1g69490.1
Brassica rapaBra010979
Carica papayaevm.model.supercontig_2.193
Capsella rubellaCarubv10009664m
Chlamydomonas reinhardtiiCre16.g653350.t1.2
Citrus clementinaCiclev10015996mCiclev10015964m
Citrus sinensisorange1.1g042138m
Cucumis sativusCucsa.188640.1Cucsa.188650.1
Eucalyptus grandisEucgr.B02675.2Eucgr.B02675.1
Glycine maxGlyma02g09350.1
Gossypium raimondiiGorai.002G172000.4Gorai.002G172000.3Gorai.002G172000.1Gorai.002G172000.2Gorai.002G172000.6
Gorai.001G151600.1Gorai.010G050600.1Gorai.005G149500.1Gorai.005G145500.1Gorai.009G391300.3
Gorai.009G391300.2Gorai.009G391300.1Gorai.007G245600.1
Linum usitatissimumLus10003708Lus10001592
Malus domesticaMDP0000319902MDP0000264715MDP0000150490
Manihot esculentacassava4.1_012733m
Mimulus guttatusmgv1a025203m
Oryza sativaLOC_Os03g12320.3LOC_Os03g12320.2LOC_Os03g12320.1
Panicum virgatumPavirv00014435mPavirv00025226m
Physcomitrella patensPp1s1_376V6.1
Phaseolus vulgarisPhvul.003G019200.2Phvul.003G019200.1
Picea abiesMA_159099g0220MA_10433938g0010
Populus trichocarpaPotri.010G106400.1Potri.010G106400.2Potri.T177300.1Potri.010G106400.3
Prunus persicappa009014m
Ricinus communis29673.m000948
Setaria italicaSi036592mSi010565mSi036620m
Selaginella moellendorffii117127
Sorghum bicolorSb01g042410.1
Thellungiella halophilaThhalv10007963m
Vitis viniferaGSVIVT01011660001
Volvox carteriVocar20012425m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny