y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.003G044000.4
FamilyGH5
Protein PropertiesLength: 468 Molecular Weight: 51960.9 Isoelectric Point: 5.0238
ChromosomeChromosome/Scaffold: 03 Start: 5657540 End: 5660498
Description
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH52014178e-38
  TNGYGPDKAPQVMQDHWNSYITEEDFNFMSANGLSAVRIPVGWWIAQDPTPPKPFVGGSSIALDNAFTWAEKYGMKVIIDLHAAKASQNGDEHSGARDGF
  LEWADSNIDETVAVIEFLAARYGVRPNLAAIALMNEPRAPGVTLDALTKYYKAAYDAIRKYTNAYVILSARLGPADPKELFSLASTMNRVAIDVHYYNLF
  SDSFSGMTVQQNIDFVN
Full Sequence
Protein Sequence     Length: 468     Download
MVYLPFLLIF NLISYFPSSS HAQIADLILP LKAVNLGNWL VTEGWMKPSR FDGIINKDLL    60
DGTQVQFLST KLKKYLCAEN GGGTVVVANR PSPSGWETFR LWRVSESCFN LRVFNKQFVG    120
LGSQGVQAVL DTPTDTETFE IVRKDDDRNR VRFKASNGLF LQAQSETLVT ADYAESSWDD    180
SDPSVFIMTI VNTLQGEFQI TNGYGPDKAP QVMQDHWNSY ITEEDFNFMS ANGLSAVRIP    240
VGWWIAQDPT PPKPFVGGSS IALDNAFTWA EKYGMKVIID LHAAKASQNG DEHSGARDGF    300
LEWADSNIDE TVAVIEFLAA RYGVRPNLAA IALMNEPRAP GVTLDALTKY YKAAYDAIRK    360
YTNAYVILSA RLGPADPKEL FSLASTMNRV AIDVHYYNLF SDSFSGMTVQ QNIDFVNNQR    420
ASDLGSLTSA NGPLVLVVVF FLQGNGLQNL LETMHQWKIT RDLLKHS*                 480
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00257Fascin3.0e-663172111+
pfam00150Cellulase3.0e-13216397198+
COG2730BglC2.0e-28205360158+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN74231.1025437137547hypothetical protein [Vitis vinifera]
EMBLCBI18831.1034376445unnamed protein product [Vitis vinifera]
EMBLCBI33033.1014374445unnamed protein product [Vitis vinifera]
EMBLCBI33035.1034376445unnamed protein product [Vitis vinifera]
RefSeqXP_002306319.10324371423predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1eqp_A6e-2719741445262A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
PDB3n9k_A8e-2719741450267A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A
PDB1eqc_A9e-2719741445262A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A
PDB1cz1_A9e-2719741445262A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution
PDB2pc8_A1e-2619741451268A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A
Signal Peptide
Cleavage Site
22
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
ES805208300443430
CO085309268212880
ES8084812741434160
CO0763842671714370
ES808481544154680.000000000003
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_010_00111.1Aquca_010_00110.1
Brachypodium distachyonBradi2g31690.1Bradi3g38500.1
Carica papayaevm.model.supercontig_55.63evm.model.supercontig_66.87evm.model.supercontig_20.222
Citrus clementinaCiclev10025463mCiclev10026955mCiclev10025415mCiclev10000913m
Citrus sinensisorange1.1g009560morange1.1g046395morange1.1g019395morange1.1g013777morange1.1g010600m
orange1.1g009475m
Cucumis sativusCucsa.104180.2Cucsa.104180.1
Eucalyptus grandisEucgr.I00417.1Eucgr.L01170.1Eucgr.L02139.1Eucgr.I00543.1Eucgr.I00415.1
Eucgr.F00486.1Eucgr.F00489.1Eucgr.F00489.3Eucgr.F00489.2Eucgr.F00487.1
Eucgr.L01169.1Eucgr.F00488.1Eucgr.I00415.2
Fragaria vescamrna16220.1-v1.0-hybridmrna16368.1-v1.0-hybridmrna22085.1-v1.0-hybridmrna16374.1-v1.0-hybrid
Glycine maxGlyma11g37881.1Glyma18g01781.2Glyma18g01781.3Glyma18g01781.1Glyma06g47761.6
Glyma06g47761.1Glyma06g47761.5Glyma06g47761.2Glyma06g47761.8Glyma06g47761.4
Glyma06g47761.7Glyma06g47761.3Glyma13g02030.2Glyma06g47750.1Glyma13g02000.1
Glyma08g14676.1Glyma05g31460.1Glyma14g34450.1
Gossypium raimondiiGorai.009G239600.6Gorai.009G239600.5Gorai.009G239600.4Gorai.009G239600.1Gorai.009G239600.3
Gorai.009G239600.2Gorai.009G239600.7Gorai.011G110800.2Gorai.011G110800.1Gorai.003G041900.1
Gorai.003G044300.1Gorai.003G044000.5Gorai.003G044200.1Gorai.003G044000.3Gorai.003G044000.2
Gorai.003G044000.1
Linum usitatissimumLus10041110Lus10036436
Malus domesticaMDP0000319015MDP0000123200MDP0000133367
Manihot esculentacassava4.1_007845mcassava4.1_026104mcassava4.1_006238m
Medicago truncatulaMedtr3g009020.1Medtr3g086750.1Medtr3g009030.1Medtr5g062290.1Medtr3g008960.1
Medtr5g062190.1Medtr3g009010.1Medtr8g091310.1
Mimulus guttatusmgv1a004896mmgv1a019918m
Oryza sativaLOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22520.1LOC_Os10g22570.1.671.954
LOC_Os10g22570.1.671.954LOC_Os10g22570.1.671.954LOC_Os05g15510.2LOC_Os05g15510.1LOC_Os08g37750.1
Panicum virgatumPavirv00046245mPavirv00011301mPavirv00018291mPavirv00046244mPavirv00011300m
Pavirv00028658mPavirv00000970mPavirv00042459mPavirv00046564m
Physcomitrella patensPp1s304_43V6.1
Phaseolus vulgarisPhvul.001G254400.1Phvul.008G171300.1Phvul.002G261800.1Phvul.008G171400.1
Picea abiesMA_10427061g0010MA_479818g0010MA_4911g0010MA_14445g0010MA_23595g0010
Populus trichocarpaPotri.007G010000.1Potri.005G167800.1Potri.007G089400.1Potri.007G089400.2Potri.005G078500.1
Potri.002G093000.1
Prunus persicappa023601mppa005425mppa019648m
Ricinus communis29810.m00014529908.m00599427889.m00017327905.m00007336339.m000016
Setaria italicaSi035257mSi006205mSi021695mSi021671mSi039329m
Si013558mSi035337m
Selaginella moellendorffii12682742658240418324801
Sorghum bicolorSb10g007500.1Sb09g008170.1Sb01g024390.1Sb10g008480.1
Vitis viniferaGSVIVT01003438001GSVIVT01006372001GSVIVT01006369001GSVIVT01002801001GSVIVT01008995001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)