y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.004G177500.6
FamilyGT77
Protein PropertiesLength: 534 Molecular Weight: 61271.2 Isoelectric Point: 5.1616
ChromosomeChromosome/Scaffold: 04 Start: 48547263 End: 48553067
Descriptionxyloglucanase 113
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT77482720
  VSNLLVGAMDTKLLEALYWKGVPVFDMGSHMSTIDVGWGSPTFHKMGREKVLLINAILPFGYELLMCDTDMVWLKDPLPYLAQYPDADILTSSDQVVPTV
  VDDRLADWKQVGAAYNIGIFHWRPTEPAIKLAKEWKDMLLADDKIWDQNGFNELARKQTGPAVDDDSGLFYAFDGTLKLGILPESIFCSGHTYFVQAMYE
  QLRLEPYALHTTFQYGGTEGKRHRL
Full Sequence
Protein Sequence     Length: 534     Download
MPPLESFKLT KELVGERAKD NVIIVTFGNF AFMDFILTWV KHLTDLDVSN LLVGAMDTKL    60
LEALYWKGVP VFDMGSHMST IDVGWGSPTF HKMGREKVLL INAILPFGYE LLMCDTDMVW    120
LKDPLPYLAQ YPDADILTSS DQVVPTVVDD RLADWKQVGA AYNIGIFHWR PTEPAIKLAK    180
EWKDMLLADD KIWDQNGFNE LARKQTGPAV DDDSGLFYAF DGTLKLGILP ESIFCSGHTY    240
FVQAMYEQLR LEPYALHTTF QYGGTEGKRH RLREAMVFYD PPEYYDAPGG FLSFKPSIPK    300
SLLLDGEHNL ESHFSLINYQ MKQIRSALAI ASLLNRTLVM PPLWCRLDRL WFSHPGVLEG    360
SMTRQPFLCP LDHVFEVNVM LKDLPEEEFG PEINIREYSF LNNPLLPQQV KESWLDVQLC    420
QEGTEDCHAS SNTSRPGLLR FPKNSTEEMF KTVFSSFKDV KVIQFSSMQG AFYSFTDKTR    480
EGKFRNRMKR YVGIWCCVEN HTPGHIYYDM YWDEKPGWKP APPQTPEEDH PPF*          540
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam03407Nucleotid_trans9.0e-4948272231+
Gene Ontology
GO TermDescription
GO:0005783endoplasmic reticulum
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAD15452.2015331528unknown protein [Arabidopsis thaliana]
DDBJBAH19600.101533112644AT2G35610 [Arabidopsis thaliana]
RefSeqNP_850250.101533112644unknown protein [Arabidopsis thaliana]
RefSeqXP_002328759.102533107638predicted protein [Populus trichocarpa]
RefSeqXP_002519934.101533108639reticulon3-A3, putative [Ricinus communis]
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GR708401298343310
DT567046285443280
DT511993302223230
GR708405270343030
DT567046283333606.7
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_011_00317.5Aquca_011_00317.4Aquca_011_00317.3Aquca_011_00317.2Aquca_011_00317.1
Arabidopsis lyrata902666
Arabidopsis thalianaAT2G35610.1
Brachypodium distachyonBradi1g15410.1Bradi3g45950.1
Brassica rapaBra017310Bra005325
Carica papayaevm.model.supercontig_90.39
Capsella rubellaCarubv10022808m
Chlamydomonas reinhardtiig13982.t1g15149.t1Cre02.g082950.t1.3Cre01.g000400.t1.2Cre01.g000450.t1.2
g4580.t1Cre07.g340950.t1.3Cre04.g224350.t1.3Cre01.g000500.t1.3Cre09.g416650.t1.2
Cre13.g574100.t1.2Cre13.g574041.t1.1Cre13.g574050.t1.2Cre07.g332500.t1.2
Citrus clementinaCiclev10011269m
Citrus sinensisorange1.1g036925m
Cucumis sativusCucsa.018320.1Cucsa.018320.10Cucsa.018320.3
Eucalyptus grandisEucgr.E01147.2Eucgr.E01147.1
Fragaria vescamrna10921.1-v1.0-hybrid
Glycine maxGlyma11g09650.2Glyma01g35690.1Glyma16g08350.1Glyma16g20730.1Glyma16g08350.3
Glyma16g08350.2
Gossypium raimondiiGorai.004G177500.4Gorai.008G219000.2Gorai.004G177500.5Gorai.004G177500.7Gorai.004G177500.9
Gorai.004G177500.2Gorai.004G177500.3Gorai.004G177500.1Gorai.008G219000.1Gorai.004G177500.8
Linum usitatissimumLus10005034Lus10027804
Malus domesticaMDP0000349223
Manihot esculentacassava4.1_003398mcassava4.1_008884m
Medicago truncatulaMedtr8g072310.1Medtr5g025590.1
Mimulus guttatusmgv1a002766m
Oryza sativaLOC_Os03g38930.1
Panicum virgatumPavirv00057126mPavirv00045617mPavirv00069114m
Physcomitrella patensPp1s46_165V6.1
Phaseolus vulgarisPhvul.003G278500.1Phvul.002G122000.1
Picea abiesMA_486176g0010MA_10433213g0010
Populus trichocarpaPotri.004G235800.1Potri.004G235800.2
Prunus persicappa002815m
Ricinus communis29827.m002651
Setaria italicaSi034728m
Selaginella moellendorffii127789
Sorghum bicolorSb01g015590.1
Thellungiella halophilaThhalv10016368m
Vitis viniferaGSVIVT01036881001
Volvox carteriVocar20007251mVocar20009385mVocar20010418mVocar20002020mVocar20004159m
Vocar20001219mVocar20001335mVocar20001723mVocar20006862mVocar20009663m
Vocar20008350mVocar20001348m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)