y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.005G113700.1
FamilyGT2
Protein PropertiesLength: 239 Molecular Weight: 26668.1 Isoelectric Point: 9.739
ChromosomeChromosome/Scaffold: 05 Start: 21736252 End: 21739313
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT281760
  SIIVPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQKLYGEDRILLRPRPKKLGLGTAYIHGLKHASGNFVVIMDADLSHHPKYLP
  CFIKKQSETGASIVTGTRYVKGGGVHGWSLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV
Full Sequence
Protein Sequence     Length: 239     Download
MEQKNKYSII VPTYNERLNI ALIVYLIFKH LRDVDFEIIV VDDGSPDGTQ EVVKQLQKLY    60
GEDRILLRPR PKKLGLGTAY IHGLKHASGN FVVIMDADLS HHPKYLPCFI KKQSETGASI    120
VTGTRYVKGG GVHGWSLMRK LTSRGANVLA QTLLWPGVSD LTGSFRLYKK SVLEDVISSC    180
VSKGYVFQME MIVRASRKGY HIEEVPITFV DRVFGSSKLG GSEIIEYLKG LSYLLVTT*     240
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00535Glycos_transf_22.0e-368176170+
cd04188DPG_synthase2.0e-429218215+
cd04179DPM_DPG-synthase_like4.0e-709195188+
cd06442DPM1_like3.0e-1339234226+
PLN02726PLN027269.0e-1771238239+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_564118.10223810246dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative [Arabidopsis thaliana]
RefSeqXP_002285933.10523810243PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002300644.1022384240predicted protein [Populus trichocarpa]
RefSeqXP_002307788.1012381238predicted protein [Populus trichocarpa]
RefSeqXP_002510671.1012381238dolichol-phosphate mannosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2z87_B0.00000001811195196A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp
PDB2z87_A0.00000001811195196A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp
PDB2z86_D0.00000001811196197A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DW49947323372390
EE26056223912390
DW510154226142390
GR05429323822390
FC91924023372390
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00839.1Aquca_007_00839.2
Arabidopsis lyrata889509
Arabidopsis thalianaAT1G20575.1
Brachypodium distachyonBradi2g19800.1
Brassica rapaBra025828Bra012235
Capsella rubellaCarubv10010457mCarubv10010118m
Chlamydomonas reinhardtiiCre03.g150950.t1.1
Citrus clementinaCiclev10003501m
Citrus sinensisorange1.1g026146m
Cucumis sativusCucsa.272070.1Cucsa.272070.2Cucsa.272070.3Cucsa.272070.4
Eucalyptus grandisEucgr.F01769.1
Fragaria vescamrna01849.1-v1.0-hybrid
Glycine maxGlyma13g24040.2Glyma07g32560.4Glyma07g32560.3Glyma07g32560.1Glyma13g24040.1
Gossypium raimondiiGorai.005G113700.2Gorai.005G113700.3Gorai.005G113700.4Gorai.002G116900.2Gorai.002G116900.1
Linum usitatissimumLus10013228Lus10030748
Malus domesticaMDP0000284475
Manihot esculentacassava4.1_014960mcassava4.1_014955m
Medicago truncatulaMedtr2g097220.1
Mimulus guttatusmgv1a012434m
Oryza sativaLOC_Os03g60939.1
Panicum virgatumPavirv00006084mPavirv00010357mPavirv00010356mPavirv00041144mPavirv00011250m
Pavirv00010359m
Physcomitrella patensPp1s182_58V6.1
Phaseolus vulgarisPhvul.003G057700.1
Picea abiesMA_10426906g0010MA_158782g0100.50.214MA_159042g1170
Populus trichocarpaPotri.005G250900.1Potri.002G010300.1Potri.005G250900.2
Prunus persicappa010139m
Ricinus communis30170.m014358
Setaria italicaSi039247mSi037228m
Selaginella moellendorffii98270
Sorghum bicolorSb01g002910.1
Thellungiella halophilaThhalv10008599m
Vitis viniferaGSVIVT01008672001
Volvox carteriVocar20000557m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny