y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.005G149500.1
FamilyCE11
Protein PropertiesLength: 184 Molecular Weight: 20409.2 Isoelectric Point: 5.6534
ChromosomeChromosome/Scaffold: 05 Start: 41028172 End: 41029312
DescriptionUDP-3-O-acyl N-acetylglycosamine deacetylase family protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CE11211721.49995e-41
  SGKVSKVKIWPGFTGQGRYFEFHSNLIPASSDFVRESLLCTSLCRDGYKIRTVEHLLSALEAKGIDNCRIQIQSLDSEDTEVEVPIFDGSANAWVEAIEQ
  VGRKEALDRCGNNVEKLAPYLSEPFYVSINDSFMVAFPASKVHISCGIDFPK
Full Sequence
Protein Sequence     Length: 184     Download
MHLSAAINSF KSSNLISWKT SGKVSKVKIW PGFTGQGRYF EFHSNLIPAS SDFVRESLLC    60
TSLCRDGYKI RTVEHLLSAL EAKGIDNCRI QIQSLDSEDT EVEVPIFDGS ANAWVEAIEQ    120
VGRKEALDRC GNNVEKLAPY LSEPFYVSIN DSFMVAFPAS KVHISCGIDF PKVNSFVLWY    180
ADC*                                                                 240
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PRK13188PRK131886.0e-2047171129+
TIGR00325lpxC3.0e-2621171156+
COG0774LpxC1.0e-3121171157+
pfam03331LpxC2.0e-3421171156+
PRK13186lpxC8.0e-3921171155+
Gene Ontology
GO TermDescription
GO:0008759UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
GO:0009245lipid A biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN61403.1011731215hypothetical protein [Vitis vinifera]
EMBLCBI26831.1011731193unnamed protein product [Vitis vinifera]
RefSeqNP_001117351.102117355207UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana]
RefSeqNP_173874.202117355207UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana]
RefSeqXP_002281269.1011731193PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4fw7_D0.00000000024712553124A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose.
PDB4fw7_C0.00000000024712553124A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose.
PDB4fw7_B0.00000000024712553124A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose.
PDB4fw7_A0.00000000024712553124A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose.
PDB4fw6_D0.00000000024712553124A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose.
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
BE05397119311730
BQ40553118771730
CU58589419131730
FY92407019111710
HX70927119411730
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_091_00088.3Aquca_091_00088.2Aquca_091_00088.1
Arabidopsis lyrata472870
Arabidopsis thalianaAT1G25054.1AT1G24793.2AT1G25210.2AT1G24793.1AT1G24880.1
AT1G25054.2AT1G25145.1AT1G25210.1
Brachypodium distachyonBradi1g69490.1
Brassica rapaBra010979
Carica papayaevm.model.supercontig_2.193
Capsella rubellaCarubv10009664m
Chlamydomonas reinhardtiiCre16.g653350.t1.2
Citrus clementinaCiclev10015996mCiclev10015964m
Citrus sinensisorange1.1g042138m
Cucumis sativusCucsa.188640.1Cucsa.188650.1
Eucalyptus grandisEucgr.B02675.2Eucgr.B02675.1
Glycine maxGlyma02g09350.1
Gossypium raimondiiGorai.002G172000.4Gorai.002G172000.5Gorai.002G172000.3Gorai.002G172000.1Gorai.002G172000.2
Gorai.002G172000.6Gorai.001G151600.1Gorai.010G050600.1Gorai.005G145500.1Gorai.009G391300.3
Gorai.009G391300.2Gorai.009G391300.1Gorai.007G245600.1
Linum usitatissimumLus10003708Lus10001592
Malus domesticaMDP0000319902MDP0000264715MDP0000150490
Manihot esculentacassava4.1_012733m
Mimulus guttatusmgv1a025203m
Oryza sativaLOC_Os03g12320.3LOC_Os03g12320.2LOC_Os03g12320.1
Panicum virgatumPavirv00014435mPavirv00025226m
Physcomitrella patensPp1s1_376V6.1
Phaseolus vulgarisPhvul.003G019200.2Phvul.003G019200.1
Picea abiesMA_159099g0220MA_10433938g0010
Populus trichocarpaPotri.010G106400.1Potri.010G106400.2Potri.T177300.1Potri.010G106400.3
Prunus persicappa009014m
Ricinus communis29673.m000948
Setaria italicaSi036592mSi010565mSi036620m
Selaginella moellendorffii117127
Sorghum bicolorSb01g042410.1
Thellungiella halophilaThhalv10007963m
Vitis viniferaGSVIVT01011660001
Volvox carteriVocar20012425m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny