y PlantCAZyme

CAZyme Information

Basic Information
SpeciesGossypium raimondii
Cazyme IDGorai.006G080700.2
FamilyGH1
Protein PropertiesLength: 644 Molecular Weight: 72957.3 Isoelectric Point: 6.4378
ChromosomeChromosome/Scaffold: 06 Start: 30807610 End: 30813058
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH1625390
  DGFFFGLATAPAHVEDKLNDAWLQFAEENPCHKSEKGDDDMMEADAVIGAADGGSHQAPLARKESSKKKKPLKVAMEAMIRGLQKFVEDESEEETASKEE
  CNHNVAAWHNVPHPEERLKFWSDPDIELNLAKDTGISIFRMGIDWSQIMPQEPVNGIKDAVNFAALERYKWIISRVRSNGMKVMLTLFHHSLPPWAGDYG
  GWKLEKTVDYFMDFTKLVVNSVSDMVDYWITFNEPHVFCMLTYSAGAWPGGHPDMIEAATSALPTGVFRQALHWMAIAHSKAYDYIHEQSTLSKKVVGVA
  HNVSFTRPYGLFDVAAVTLANSLTLFPYVDSICDKLDFIGINYYGQEVISGAGLKLVETDEYSESGRGVYPGGLFRLLIDFHERYKHLKVPFIITENGIA
  DETDVIRRPYLLEHLLAVYAAMLKGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANGLVRIPRPSYYLFTKVVTT
Full Sequence
Protein Sequence     Length: 644     Download
MAFAALFISA TKLAGIIMTV SIAANAFSFS RYRKKHLRRF DSPIVESSDT LADFNVNGEE    60
EDGFFFGLAT APAHVEDKLN DAWLQFAEEN PCHKSEKGDD DMMEADAVIG AADGGSHQAP    120
LARKESSKKK KPLKVAMEAM IRGLQKFVED ESEEETASKE ECNHNVAAWH NVPHPEERLK    180
FWSDPDIELN LAKDTGISIF RMGIDWSQIM PQEPVNGIKD AVNFAALERY KWIISRVRSN    240
GMKVMLTLFH HSLPPWAGDY GGWKLEKTVD YFMDFTKLVV NSVSDMVDYW ITFNEPHVFC    300
MLTYSAGAWP GGHPDMIEAA TSALPTGVFR QALHWMAIAH SKAYDYIHEQ STLSKKVVGV    360
AHNVSFTRPY GLFDVAAVTL ANSLTLFPYV DSICDKLDFI GINYYGQEVI SGAGLKLVET    420
DEYSESGRGV YPGGLFRLLI DFHERYKHLK VPFIITENGI ADETDVIRRP YLLEHLLAVY    480
AAMLKGVPVL GYLFWTISDN WEWADGYGPK FGLVAVDRAN GLVRIPRPSY YLFTKVVTTG    540
KITREDREKA WNELQKAAKE KQTRPFYREV NKQGLMYAGG LDEPTQRPFI ERDWRFGHYE    600
MEGLQDPLSR LSRYLLRPFS LRKKRKHKKV NSELVLEPLE LSA*                     660
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR01233lacG3.0e-21175517416+
PRK13511PRK135114.0e-27181542438+
pfam00232Glyco_hydro_16.0e-56189539407+
TIGR03356BGL1.0e-56186533391+
COG2723BglB2.0e-64175543425+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAJ87636.1016401636putative beta-glycosidase [Glycine max]
EMBLCAJ87637.1016391638putative beta-glycosidase [Solanum lycopersicum]
EMBLCBI22845.1016421618unnamed protein product [Vitis vinifera]
RefSeqXP_002280268.1016421647PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002316058.1016381611predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4ha4_A2.00386e-4315154518471A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus
PDB4ha3_A2.00386e-4315154518471A Chain A, Structure Of Beta-Glycosidase From Acidilobus Saccharovorans In Complex With Tris
PDB3apg_D4.00001e-4017554552460A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus
PDB3apg_C4.00001e-4017554552460A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus
PDB3apg_B4.00001e-4017554552460A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus
Transmembrane Domains
StartEnd
527
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CO0996752693366040
CX0459473042785810
GO8410083242025240
CO0909842693766440
GO8544993342095370
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_073_00022.2Aquca_073_00022.1Aquca_073_00022.3Aquca_073_00022.4
Arabidopsis lyrata477956
Arabidopsis thalianaAT3G06510.1AT3G06510.2
Brachypodium distachyonBradi4g09920.1
Brassica rapaBra040275Bra029584
Capsella rubellaCarubv10013225m
Citrus clementinaCiclev10004508mCiclev10004510mCiclev10004513mCiclev10004514mCiclev10004507m
Ciclev10004684m
Citrus sinensisorange1.1g008043m.64.291orange1.1g008043m.327.475orange1.1g008043m.327.475orange1.1g008043m.64.291orange1.1g008982m
orange1.1g006266morange1.1g006265morange1.1g006252morange1.1g006261morange1.1g011240m
orange1.1g008980m
Cucumis sativusCucsa.246950.2Cucsa.246950.1
Eucalyptus grandisEucgr.H04080.1Eucgr.H04080.2
Fragaria vescamrna05024.1-v1.0-hybrid
Glycine maxGlyma07g36470.2Glyma05g06465.1Glyma17g04130.1
Gossypium raimondiiGorai.006G080700.1
Linum usitatissimumLus10043048Lus10011147
Malus domesticaMDP0000187687
Manihot esculentacassava4.1_003404m
Mimulus guttatusmgv1a023966m
Oryza sativaLOC_Os11g45710.1LOC_Os11g45710.2LOC_Os11g45710.3LOC_Os11g45710.4LOC_Os11g45710.5
LOC_Os11g45710.6LOC_Os11g45710.7
Panicum virgatumPavirv00063330mPavirv00063329mPavirv00005855m
Physcomitrella patensPp1s37_35V6.1Pp1s25_336V6.1
Phaseolus vulgarisPhvul.003G118100.1Phvul.003G118100.2
Picea abiesMA_36535g0010MA_10436797g0010MA_194231g0010MA_10111401g0010MA_7936147g0010
Populus trichocarpaPotri.010G149500.3Potri.010G149500.1Potri.010G149500.2
Prunus persicappa002585m
Ricinus communis29889.m003347.69.28529889.m003347.319.46729889.m003347.319.46729889.m003347.69.285
Setaria italicaSi026098mSi026096m
Selaginella moellendorffii110274935
Sorghum bicolorSb05g026810.3Sb05g026810.2Sb05g026810.1
Thellungiella halophilaThhalv10020302m
Vitis viniferaGSVIVT01034947001
Zea maysAC148152.3_FGT008
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny