y PlantCAZyme

CAZyme Information

Basic Information
SpeciesFragaria vesca
Cazyme IDmrna13071.1-v1.0-hybrid
FamilyGH19
Protein PropertiesLength: 223 Molecular Weight: 24083.5 Isoelectric Point: 8.7493
ChromosomeChromosome/Scaffold: 1 Start: 7313368 End: 7314345
Descriptionbasic chitinase
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH19342160
  RKKELAAFLGQTSHETTGGWPSAPDGPYAWGYCFIKELNEAVYCTPSAQYPCAAGKKYYGRGPIQLTHNYNYGPAGKAIGVDLINNPDLVATNPVISFKT
  AIWFWMTPQGNKPSSHDVITGRWNPSAADRSAGRVPGYGVITNIINGGLECGRGQDNRVADRIGFYKRYCGMLGVGTGDNLDC
Full Sequence
Protein Sequence     Length: 223     Download
MGAARATGST SMMLLFLLLD LSMGLAQQVM LLPRKKELAA FLGQTSHETT GGWPSAPDGP    60
YAWGYCFIKE LNEAVYCTPS AQYPCAAGKK YYGRGPIQLT HNYNYGPAGK AIGVDLINNP    120
DLVATNPVIS FKTAIWFWMT PQGNKPSSHD VITGRWNPSA ADRSAGRVPG YGVITNIING    180
GLECGRGQDN RVADRIGFYK RYCGMLGVGT GDNLDCYNQR PF*                      240
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG3179COG31799.0e-1134206197+
cd00442lysozyme_like6.0e-1939178140+
cd00325chitinase_glyco_hydro_192.0e-11834216183+
pfam00182Glyco_hydro_193.0e-12434216184+
Gene Ontology
GO TermDescription
GO:0004568chitinase activity
GO:0006032chitin catabolic process
GO:0016998cell wall macromolecule catabolic process
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4dyg_B0222222243A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB4dyg_A0222222243A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB4dwx_B0222222243A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds
PDB4dwx_A0222222243A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds
PDB3cql_B03422253242A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya
Transmembrane Domains
StartEnd
1332
Signal Peptide
Cleavage Site
26
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_001_00867.1Aquca_001_00868.1Aquca_003_00268.1Aquca_015_00468.1Aquca_015_00466.1
Aquca_011_00480.1Aquca_017_00017.2Aquca_017_00017.1
Arabidopsis lyrata870854346169483472483473483470
485842483469903754483471485118
318457318019887375912061470596
Arabidopsis thalianaAT2G43570.1AT2G43610.1AT2G43620.1AT2G43590.1AT3G54420.1
AT2G43580.1AT1G56680.1AT3G47540.1AT3G47540.2AT2G43600.1
AT3G16920.1AT3G12500.1AT1G02360.1AT4G01700.1AT1G05850.1
Brachypodium distachyonBradi3g48230.1Bradi5g14430.1Bradi4g34040.1Bradi2g11140.1Bradi1g29887.1
Bradi2g47210.1Bradi1g29880.1Bradi2g47190.1Bradi2g26000.1Bradi3g32340.1
Bradi2g36780.1Bradi3g40320.1
Brassica rapaBra000311Bra022797Bra000310Bra037698Bra000314
Bra023009Bra007071Bra004773Bra004771Bra004772
Bra000315Bra037699Bra005345Bra027940Bra000312
Bra039597Bra034754Bra038726Bra001453Bra036316
Bra001454Bra033318Bra038727Bra015457Bra030628
Carica papayaevm.model.supercontig_9.348evm.model.supercontig_50.122evm.model.supercontig_57.23evm.TU.contig_34724.1evm.model.supercontig_183.6
Capsella rubellaCarubv10023810mCarubv10023814mCarubv10025331mCarubv10025277mCarubv10023855m
Carubv10017824mCarubv10023795mCarubv10023857mCarubv10009026mCarubv10023874m
Carubv10025330mCarubv10018014mCarubv10014131mCarubv10014185mCarubv10010007m
Carubv10020662mCarubv10002987mCarubv10009762m
Citrus clementinaCiclev10022063mCiclev10022050mCiclev10023297mCiclev10021602mCiclev10022123m
Ciclev10002362mCiclev10005421mCiclev10026057mCiclev10021721mCiclev10028959m
Ciclev10028964mCiclev10028831mCiclev10021187mCiclev10003750mCiclev10023611m
Citrus sinensisorange1.1g026928morange1.1g023873morange1.1g032687morange1.1g032636morange1.1g020187m
orange1.1g024628morange1.1g026315morange1.1g043794morange1.1g025237morange1.1g029634m
orange1.1g036277morange1.1g030642morange1.1g033376morange1.1g045378m
Cucumis sativusCucsa.044140.1Cucsa.152090.1Cucsa.252640.2Cucsa.252640.1Cucsa.044130.1
Cucsa.044190.1Cucsa.374230.1Cucsa.044170.1Cucsa.322970.1Cucsa.044160.1
Cucsa.094420.1
Eucalyptus grandisEucgr.H00323.1Eucgr.H00327.1Eucgr.H00329.1Eucgr.A00020.1Eucgr.H00320.1
Eucgr.H00328.1Eucgr.H00324.1Eucgr.H00321.1Eucgr.H00326.1Eucgr.H00325.1
Eucgr.K02166.2Eucgr.K02166.1Eucgr.A00021.1Eucgr.H00322.1.154.247Eucgr.H00322.1.154.247
Eucgr.H04034.1Eucgr.L00941.1.97.206Eucgr.L00941.1.97.206Eucgr.L00939.1.135.205Eucgr.L00939.1.135.205
Eucgr.I01495.1Eucgr.I02271.1Eucgr.J02518.1Eucgr.J02519.1Eucgr.L00937.1
Eucgr.L00938.1Eucgr.A00999.1Eucgr.H00455.2Eucgr.H00455.1Eucgr.I02267.1
Eucgr.I02246.1Eucgr.I02242.1Eucgr.H00322.1.79.146Eucgr.H00322.1.79.146Eucgr.L00941.1.27.93
Eucgr.L00941.1.27.93Eucgr.I02240.1Eucgr.I01953.1Eucgr.I02269.1
Fragaria vescamrna21704.1-v1.0-hybridmrna02717.1-v1.0-hybridmrna21702.1-v1.0-hybridmrna21697.1-v1.0-hybridmrna22465.1-v1.0-hybrid
mrna05162.1-v1.0-hybridmrna13072.1-v1.0-hybrid.384.618mrna13072.1-v1.0-hybrid.384.618mrna13072.1-v1.0-hybrid.384.618mrna24481.1-v1.0-hybrid
mrna17204.1-v1.0-hybridmrna29267.1-v1.0-hybridmrna13072.1-v1.0-hybrid.191.299mrna13072.1-v1.0-hybrid.191.299mrna13072.1-v1.0-hybrid.191.299
mrna13072.1-v1.0-hybrid.74.133mrna13072.1-v1.0-hybrid.74.133mrna13072.1-v1.0-hybrid.74.133
Glycine maxGlyma11g13270.2Glyma13g42210.1Glyma12g05310.1Glyma01g36480.1Glyma09g04330.1
Glyma15g15360.1Glyma10g27870.2.165.239Glyma10g27870.2.165.239Glyma02g04820.1Glyma16g22680.1
Glyma19g40960.1Glyma02g01020.1Glyma02g04820.3Glyma02g04820.2Glyma08g29090.1
Glyma18g51980.1Glyma10g27870.2.29.163Glyma10g27870.2.29.163Glyma12g05301.1
Gossypium raimondiiGorai.006G230700.1Gorai.011G137200.1Gorai.006G230300.1Gorai.006G230600.1Gorai.006G230400.1
Gorai.011G137500.1Gorai.006G230600.2Gorai.011G137300.1Gorai.002G203600.1Gorai.002G203500.1
Gorai.007G117600.1Gorai.010G058900.1Gorai.005G258100.1Gorai.005G258000.1Gorai.005G257900.1
Gorai.005G257900.2Gorai.011G198500.1Gorai.011G005100.1Gorai.006G078900.1
Linum usitatissimumLus10003587Lus10032794Lus10010861Lus10024368Lus10010862
Lus10035621.215.414Lus10035621.215.414Lus10003226Lus10024367Lus10035624
Lus10003231Lus10003227Lus10035625Lus10024369Lus10024366
Lus10010866Lus10010864Lus10003230Lus10035618Lus10000453
Lus10035620.203.389Lus10035620.203.389Lus10028377Lus10041830Lus10010863
Lus10035620.29.206Lus10035620.29.206Lus10041831Lus10000193Lus10016872
Lus10009968Lus10038026Lus10041278Lus10037430Lus10037737
Lus10037428Lus10041282Lus10035621.80.147Lus10035621.80.147Lus10000217
Lus10028378Lus10041829
Malus domesticaMDP0000702868MDP0000193383MDP0000873235MDP0000535247MDP0000430546
MDP0000139609MDP0000712620MDP0000527355MDP0000218549MDP0000424978
MDP0000701077MDP0000418201MDP0000128190.164.225MDP0000128190.164.225MDP0000118748
MDP0000710349MDP0000224397MDP0000417095MDP0000142174MDP0000945042
MDP0000236701MDP0000132926MDP0000701985MDP0000207220MDP0000128190.44.162
MDP0000128190.44.162MDP0000421802MDP0000655939MDP0000258512
Manihot esculentacassava4.1_013738mcassava4.1_021052mcassava4.1_034087mcassava4.1_033496mcassava4.1_030454m
cassava4.1_014554mcassava4.1_027629mcassava4.1_012136mcassava4.1_012170mcassava4.1_011409m
cassava4.1_032694mcassava4.1_011797mcassava4.1_013633mcassava4.1_011942mcassava4.1_023221m
cassava4.1_024852m
Medicago truncatulaMedtr2g099470.1.351.553Medtr2g099470.1.351.553Medtr2g099470.1.80.281Medtr2g099470.1.80.281Medtr2g034680.1
Medtr3g118390.1Medtr8g074330.1.80.313Medtr8g074330.1.80.313Medtr8g074350.1Medtr7g110780.1
Medtr8g074330.1.403.622Medtr8g074330.1.403.622Medtr7g021640.1
Mimulus guttatusmgv1a023931mmgv1a011768mmgv1a011672mmgv1a011702mmgv1a010106m
mgv1a010097mmgv1a010054mmgv1a010053mmgv1a010049m
Oryza sativaLOC_Os04g41620.1LOC_Os04g41680.1LOC_Os02g39330.1LOC_Os03g04060.1LOC_Os06g51060.1
LOC_Os01g18400.1LOC_Os06g51050.1LOC_Os05g33130.1LOC_Os05g33140.1LOC_Os03g30470.1
LOC_Os05g04690.1LOC_Os10g39680.1LOC_Os05g33150.1LOC_Os08g41100.1LOC_Os09g32080.2
LOC_Os09g32080.1LOC_Os10g39700.1
Panicum virgatumPavirv00001344mPavirv00013542mPavirv00060537mPavirv00042800mPavirv00034056m
Pavirv00032638mPavirv00050897mPavirv00070140mPavirv00057986mPavirv00011518m
Pavirv00032107mPavirv00050898mPavirv00067187mPavirv00010783mPavirv00065101m
Pavirv00060702mPavirv00012807mPavirv00030437mPavirv00052078mPavirv00025489m
Pavirv00018303mPavirv00012836mPavirv00027304mPavirv00066381mPavirv00057487m
Pavirv00001806mPavirv00061195mPavirv00052213mPavirv00054024mPavirv00070706m
Pavirv00069180mPavirv00027778mPavirv00070141m
Physcomitrella patensPp1s184_140V6.1Pp1s15_171V6.1Pp1s197_8V6.1Pp1s134_173V6.1Pp1s178_23V6.1
Pp1s309_77V6.1Pp1s287_72V6.1Pp1s197_7V6.1Pp1s55_35V6.1Pp1s305_13V6.1
Pp1s306_17V6.1Pp1s133_32V6.1
Phaseolus vulgarisPhvul.005G155800.1Phvul.011G051500.1Phvul.002G114100.1Phvul.009G254400.1Phvul.009G116600.1
Phvul.009G116300.1Phvul.002G114200.1Phvul.009G116700.1Phvul.001G218600.1Phvul.003G268600.1
Phvul.003G268500.1Phvul.007G208900.1Phvul.009G116500.1Phvul.008G018100.1
Picea abiesMA_191308g0010MA_295712g0010MA_159244g0020MA_10427514g0010MA_36141g0010
MA_10435326g0010MA_448160g0010MA_10431378g0010MA_114934g0010MA_10262473g0010
MA_741127g0010MA_10431378g0020MA_44734g0010MA_10430424g0010MA_10294851g0010
MA_7544918g0010MA_853077g0010MA_10099693g0010.98.197MA_10099693g0010.98.197MA_170598g0010
MA_10431347g0010MA_656046g0010MA_595151g0010MA_9376357g0010MA_19732g0010
MA_5029466g0010MA_60284g0010MA_224992g0010MA_10435764g0010MA_4984466g0010
MA_8921185g0010MA_123187g0010MA_18470g0010MA_10313114g0010MA_80085g0010
MA_18470g0020MA_10425967g0010MA_6639198g0010MA_3814373g0010MA_726207g0010.58.202
MA_726207g0010.58.202MA_726207g0010.206.325MA_726207g0010.206.325MA_177881g0010MA_9682123g0010
MA_4343642g0010MA_5970350g0010MA_10099693g0010.27.98MA_10099693g0010.27.98MA_102538g0010
MA_3682012g0010MA_9952704g0010MA_490809g0010MA_134123g0010
Populus trichocarpaPotri.013G125100.1Potri.019G093800.1Potri.019G093900.1Potri.019G094100.1Potri.019G094000.1
Potri.013G125000.1Potri.019G093700.1Potri.009G142200.2Potri.010G141600.3Potri.010G141600.2
Potri.009G141700.1Potri.004G182000.1Potri.002G186500.1Potri.T175200.1Potri.014G111800.1
Potri.009G142300.1Potri.009G141800.1Potri.009G142200.1Potri.009G142000.2Potri.009G142000.1
Potri.T175300.2Potri.T175300.1Potri.009G142100.1Potri.004G182100.1Potri.004G182100.4
Potri.004G182100.3Potri.004G182100.5Potri.010G141600.1Potri.014G146600.4Potri.014G146600.3
Potri.014G146600.1Potri.014G146600.2Potri.004G182100.6Potri.004G182100.7Potri.004G182100.2
Prunus persicappa024941mppa010952mppa010947mppa010731mppa009844m
ppa009653mppa009661mppa018821mppa008743mppa025091m
ppa008646mppa008859mppa017347mppa008643m
Ricinus communis27753.m00001629830.m00141829641.m00037629889.m00326830098.m001726
29797.m00035630076.m00454729797.m00035427852.m000039
Setaria italicaSi020916mSi010816mSi010827mSi010980mSi010838m
Si010776mSi011679mSi010959mSi018061mSi037098m
Si024048m.143.263Si024048m.143.263Si002491mSi008781mSi037175m
Si024596mSi014136mSi039658mSi030486mSi024048m.65.133
Si024048m.65.133
Selaginella moellendorffii1270214312431343144306
430442974332429836340
4267101382177582138199426722
13820314583614768446851443112
227948
Sorghum bicolorSb06g021240.1Sb06g021230.1Sb06g021250.1Sb06g021210.1Sb06g021220.1
Sb06g021260.1Sb03g013610.1Sb04g025430.1Sb01g048140.1Sb07g027310.1
Sb09g001210.1Sb06g016510.1Sb09g003040.1Sb03g011710.1Sb3219s002010.1
Sb09g019660.1Sb02g028770.1
Thellungiella halophilaThhalv10001590mThhalv10001575mThhalv10010625mThhalv10001581mThhalv10001579m
Thhalv10017716mThhalv10001580mThhalv10001788mThhalv10014413mThhalv10021094m
Thhalv10021149mThhalv10028870mThhalv10008465mThhalv10008219mThhalv10008215m
Thhalv10001652m
Vitis viniferaGSVIVT01038125001GSVIVT01038117001GSVIVT01038111001GSVIVT01038116001GSVIVT01038126001
GSVIVT01038114001.324.523GSVIVT01038114001.324.523GSVIVT01028243001GSVIVT01038113001GSVIVT01038108001
GSVIVT01038120001GSVIVT01031685001GSVIVT01035029001GSVIVT01007190001GSVIVT01038114001.16.134
GSVIVT01038114001.16.134
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)