y PlantCAZyme

CAZyme Information

Basic Information
SpeciesFragaria vesca
Cazyme IDmrna29146.1-v1.0-hybrid
FamilyGT92
Protein PropertiesLength: 510 Molecular Weight: 57498.3 Isoelectric Point: 8.9172
ChromosomeChromosome/Scaffold: 5 Start: 19449448 End: 19451399
DescriptionDomain of unknown function (DUF23)
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922364630
  EYLYCGSSLYGNLSASRIKEWMAYHAWFFGPKSHFVFHDAGGVSPEARAVLEPWVKAGRATIQDIKDQAEYDGYYYNQFLVVNDCLHKYRYAANWTFYFD
  VDEYIYLPDGNTLESVLNEFLDYTQFTIEQNPMSSALCLNDSTQDYSRQWGFEKLLFRDSRTGLRRDRKYAIQAKQAYATGVHMSENVAGKTLHKTEDKI
  RYYHYHNSITVPGEVCRELVPMSAKNNV
Full Sequence
Protein Sequence     Length: 510     Download
MRKETPLPSS SVPGGAAPPL AKFVSSCFEK KPLFLTLLAL TFVMLVWNLP PYYQTLLSSS    60
SCSASLAAAT AAASNITSLP LTASSLPLKQ QKLSSTPKPD PNKRVFQSYG KAAALFVQMG    120
AYRGGPKTFA VVGLASKPIH VYGRPWFKCE WISTNGSSLR ALAYKMLPDW GYGRVYTVVV    180
VNCTFPVNPN HDNSGGKLTV NAYYGDNPRK FEKFTALEEA PGSYNESKFH PPYEYEYLYC    240
GSSLYGNLSA SRIKEWMAYH AWFFGPKSHF VFHDAGGVSP EARAVLEPWV KAGRATIQDI    300
KDQAEYDGYY YNQFLVVNDC LHKYRYAANW TFYFDVDEYI YLPDGNTLES VLNEFLDYTQ    360
FTIEQNPMSS ALCLNDSTQD YSRQWGFEKL LFRDSRTGLR RDRKYAIQAK QAYATGVHMS    420
ENVAGKTLHK TEDKIRYYHY HNSITVPGEV CRELVPMSAK NNVTMYNNLP YVFDDNMKKL    480
ASTVKEFERK TIGDVQTPQP AHINIPRHT*                                     540
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam13704Glyco_tranf_2_40.0001252352103+
pfam01697Glyco_transf_924.0e-25235427207+
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus clementinaCiclev10014882m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10008076Lus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s98_254V6.1Pp1s198_141V6.1Pp1s227_17V6.1Pp1s35_63V6.1
Pp1s32_144V6.1Pp1s112_159V6.1Pp1s237_6V6.1Pp1s225_53V6.1Pp1s556_1V6.1
Pp1s25_268V6.1Pp1s401_34V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)